STRINGSTRING
NGR_c20000 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c20000" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c20000annotation not available (394 aa)    
Predicted Functional Partners:
NGR_c20020
annotation not available (358 aa)
 
          0.935
NGR_c20010
annotation not available (268 aa)
 
          0.920
NGR_c20030
annotation not available (1024 aa)
 
          0.878
NGR_c19990
annotation not available (228 aa)
              0.802
NGR_c09610
annotation not available (116 aa)
   
          0.691
NGR_c21980
annotation not available (71 aa)
   
          0.673
NGR_c19160
Uncharacterized protein; Similar to chromosomal replication initiator protein DnaA (245 aa)
   
          0.660
cya4
annotation not available (584 aa)
   
          0.655
gp2
DNA packaging protein Gp2; Terminase large subunit (454 aa)
   
          0.640
cyaF
annotation not available (635 aa)
   
          0.629
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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