STRINGSTRING
NGR_c20180 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c20180" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c20180annotation not available (446 aa)    
Predicted Functional Partners:
NGR_c11430
annotation not available (454 aa)
          0.726
NGR_c05540
annotation not available (345 aa)
          0.650
NGR_c01700
annotation not available (1227 aa)
         
  0.626
NGR_c25260
annotation not available (1256 aa)
 
 
  0.622
NGR_c25820
annotation not available (266 aa)
 
 
 
  0.602
NGR_c30790
annotation not available (1852 aa)
     
 
  0.583
NGR_c13780
annotation not available (511 aa)
   
   
  0.580
NGR_a03920
Uncharacterized protein y4eA; y4eA; NGR234_79; Belongs to the phD/YefM antitoxin family (88 aa)
   
          0.564
NGR_c21950
annotation not available (264 aa)
 
 
 
  0.547
NGR_c20190
annotation not available (678 aa)
              0.539
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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