STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25781.1Putative calcium-binding hemolysin-like protein. (446 aa)    
Predicted Functional Partners:
ACP24928.1
Possible protease.
 
     0.769
ACP24350.1
Hypothetical protein.
  
     0.750
ACP26283.1
Putative RTX toxin hemolysin-type protein.
  
     0.614
ACP26750.1
Putative secretion protein Type I; HlyD family.
 
  
 0.590
ACP25782.1
Putative P-loop ATPase.
       0.502
ACP26749.1
Putative Type I secretion system ATPase, PrtD.
 
 
 0.498
ACP25935.1
Ferrichrysobactin receptor precursor.
    
 
 0.493
ACP26111.1
Putative hemin receptor.
    
 
 0.493
ACP26186.1
Adenylate/guanylate cyclase.
  
  
 0.460
ilvI
Acetolactate synthase isozyme III large subunit.
  
    0.432
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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