Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP25782.1Putative P-loop ATPase. (678 aa)    
Predicted Functional Partners:
ACP25029.1
Putative transmembrane anchored protein.
  
     0.689
ACP24649.1
Hypothetical protein.
  
     0.624
ACP25783.1
Hypothetical protein.
       0.570
ACP24061.1
Predicted LuxR family transcriptional regulator.
  
     0.543
ACP26424.1
Conserved hypothetical protein.
  
     0.535
ACP24675.1
Hypothetical protein.
  
     0.505
ACP24744.1
Putative transmemrbane protein.
  
     0.505
ACP25781.1
Putative calcium-binding hemolysin-like protein.
       0.502
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
   0.493
ACP25460.1
Putative cyclic beta-1,2-glucan modification protein.
  
     0.476
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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