STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
degPSerine protease; Belongs to the peptidase S1C family. (502 aa)    
Predicted Functional Partners:
ACP24576.1
Serine protease do-like precursor; Belongs to the peptidase S1C family.
  
  
 
0.912
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.764
ACP24009.1
Beta-ketoacyl synthase.
  
 0.658
ACP25790.1
Putative transmembrane serine protease; HflC and HflK could regulate a protease.
 
 
 0.615
ACP23832.1
Sensor protein.
  
  
 0.605
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 0.571
alaS1
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 
 0.563
ACP26379.1
Serine--glyoxylate aminotransferase; SGAT.
    
  0.557
ACP25791.1
Putative transmembrane serine protease; HflC and HflK could encode or regulate a protease.
  
 
 0.554
cya3
Adenylate cyclase.
  
 0.522
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.