STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25797.1Putative transposase for insertion sequence NGRIS-20d. (460 aa)    
Predicted Functional Partners:
ACP24721.1
Putative transposase for insertion sequence NGRIS-22c; Similar to y4rI of pNGR234a.
  
     0.715
ACP25252.1
Putative transposase for insertion sequence NGRIS-22b; Similar to y4rI of pNGR234a.
  
     0.715
ACP26842.1
Putative transposase for insertion sequence NGRIS-22a; Similar to y4rI of pNGR234a.
  
     0.715
ACP25798.1
Malate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.496
ACP25799.1
Hypothetical protein.
       0.496
ACP25800.1
Putative ATP-binding component of ABC transporter.
       0.496
ACP25801.1
Putative permease component of ABC transporter.
       0.496
ACP23877.1
Integrase catalytic core domain protein.
 
     0.495
ACP24517.1
Integrase catalytic region.
 
     0.494
ACP26075.1
Putative transposase for insertion sequence NGRIS-10.
 
     0.493
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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