STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25801.1Putative permease component of ABC transporter. (295 aa)    
Predicted Functional Partners:
ACP25800.1
Putative ATP-binding component of ABC transporter.
 0.997
ACP26489.1
Putative substrate-binding component of ABC transporter.
 
 0.989
ACP25590.1
Putative ATP-binding component of ABC transporter.
 0.988
ACP26491.1
Putative glycine betaine/L-proline transport ATP binding subunit.
 0.988
ACP26125.1
Putative glycine betaine/L-proline ABC transporter, ATP-binding protein.
 0.987
ACP24588.1
Hypothetical amino acid ABC-transporter permease protein.
 
 0.979
ACP25589.1
Putative substrate-binding component of ABC transporter.
 
 0.978
ACP26123.1
Proline/glycine betaine ABC transporter, substrate-binding protein.
 
 0.973
ACP25798.1
Malate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.773
ACP25799.1
Hypothetical protein.
       0.773
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.