STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25803.1Putative transcriptional regulator, TetR family. (209 aa)    
Predicted Functional Partners:
ACP25804.1
Putative flavoprotein oxidoreductase.
 
  
 0.903
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.776
ACP25798.1
Malate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.561
ACP25799.1
Hypothetical protein.
       0.561
ACP25800.1
Putative ATP-binding component of ABC transporter.
       0.561
ACP25801.1
Putative permease component of ABC transporter.
       0.561
ACP24399.1
long-chain-fatty-acid--CoA ligase.
     
 0.464
ACP25805.1
Putative transcriptional regulator protein.
  
    0.464
ACP25806.1
Electron transfer flavoprotein, beta subunit.
  
    0.463
ACP25807.1
Electron transfer flavoprotein, alpha subunit.
  
  
 0.437
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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