STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livFPredicted branched-chain amino acid transport ATP-binding protein. (240 aa)    
Predicted Functional Partners:
ACP25831.1
Branched-chain amino acid ABC transporter, permease protein; braE-2; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
ACP27159.1
Putative branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.983
ACP26276.1
Putative transmembrane component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.980
ACP25830.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.957
ACP24392.1
Putative permease component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.948
ACP26791.1
Putative permease component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.940
livG
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
  
0.902
ACP25829.1
Branched-chain amino acid ABC transporter, periplasmic substrate-binding protein.
 
  
 0.881
ACP27157.1
Putative extracellular ligand-binding receptor.
 
  
 0.831
ACP24341.1
Amino acid ABC transporter, substrate-binding protein.
 
  
 0.825
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.