STRINGSTRING
NGR_c20740 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c20740" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c20740annotation not available (397 aa)    
Predicted Functional Partners:
NGR_c20730
annotation not available (1046 aa)
 
  0.980
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (647 aa)
   
 
  0.741
tolC
annotation not available (456 aa)
 
 
  0.693
NGR_c35210
annotation not available (1048 aa)
 
  0.601
NGR_c19600
annotation not available (1076 aa)
 
  0.598
mexF
annotation not available (1058 aa)
 
  0.598
NGR_c28570
annotation not available (1050 aa)
 
  0.597
NGR_c03750
annotation not available (516 aa)
   
 
  0.588
NGR_c00620
annotation not available (1061 aa)
 
  0.585
NGR_c24910
annotation not available (1105 aa)
 
 
  0.483
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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