STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25889.1O-methyltransferase. (225 aa)    
Predicted Functional Partners:
ACP25888.1
Putative S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase.
 
  
 0.995
ACP24009.1
Beta-ketoacyl synthase.
 
 
 
 0.545
ACP24399.1
long-chain-fatty-acid--CoA ligase.
   
 
 0.478
bioB
Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.475
ACP25887.1
6-aminohexanoate-dimer hydrolase protein.
       0.472
ACP25890.1
Putative glycosyl hydrolase/lysozyme.
       0.472
ACP24820.1
Cytochrome P450 hydroxylase.
    
 
 0.448
ACP27139.1
Cytochrome P450 family protein.
    
 
 0.448
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.