STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25906.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (461 aa)    
Predicted Functional Partners:
ACP25905.1
Putative dehydrogenase.
 
 0.955
glnA2
Glutamine synthetase.
 
  
 0.847
ACP25910.1
Transcriptional regulator, RpiR family.
 
    0.761
ACP25909.1
N-formylglutamate amidohydrolase.
 
     0.703
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 
 0.660
ACP24009.1
Beta-ketoacyl synthase.
  
 
 0.533
ACP24400.1
Iron-containing alcohol dehydrogenase; Similar to DddB.
 
 0.531
ACP23985.1
Predicted two-component sensor histidine kinase.
  
 
 0.516
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.512
parA
Putative chromosome partitioning protein A.
       0.453
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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