STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25910.1Transcriptional regulator, RpiR family. (292 aa)    
Predicted Functional Partners:
ACP25909.1
N-formylglutamate amidohydrolase.
 
  
 0.895
glnA2
Glutamine synthetase.
 
    0.783
ACP25905.1
Putative dehydrogenase.
 
   
 0.780
ACP25906.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
    0.761
iolB
Myo-inositol catabolism IolB domain protein.
     
 0.523
xylF
Xylose binding protein transport system, XylF.
      
 0.473
ACP25911.1
Putative solute-binding component of ABC transporter.
       0.456
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.