Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP25929.1Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
ACP25930.1
Putative ABC transporter periplasmic binding protein.
 
     0.871
ACP25933.1
Putative transmembrane component of ABC transporter.
 
     0.805
ACP25932.1
Putative transmembrane component of ABC transporter.
 
     0.803
ACP25934.1
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
     0.594
ACP25931.1
Putative ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
 
    0.583
ACP25928.1
Lipase/esterase.
       0.475
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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