Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP25981.1Putative oxidoreductase. (667 aa)    
Predicted Functional Partners:
ACP25982.1
Putative transcriptional regulator, AraC family.
 
    0.833
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 0.681
ACP25726.1
Putative TetR family transcriptional regulator.
  
     0.640
ACP24009.1
Beta-ketoacyl synthase.
  
 
 0.590
ACP25541.1
Probable oxidoreductase protein.
  
    0.568
ACP24513.1
Aldo/keto reductase.
 
 
 0.550
ACP26608.1
Hypothetical protein.
  
 
 
 0.542
ACP24411.1
Putative UDP-glucose 4-epimerase.
 
  
 0.529
ACP25983.1
Putative reductase protein.
 
    0.529
cya3
Adenylate cyclase.
 
 
 
 0.509
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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