STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25982.1Putative transcriptional regulator, AraC family. (298 aa)    
Predicted Functional Partners:
ACP25981.1
Putative oxidoreductase.
 
    0.830
ACP25983.1
Putative reductase protein.
 
     0.618
ACP25210.1
Putative AraC family transcriptional regulator.
 
 
 0.592
ACP26385.1
Transcriptional regulator, AraC family.
 
 
 0.570
ACP24670.1
Transcriptional regulator, AraC family.
  
     0.565
rpoA
DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.485
ACP27431.1
Transcriptional regulator, AraC family.
  
     0.459
ACP26384.1
Putative phosphoglycerate dehydrogenase protein.
  
     0.439
ACP25200.1
Putative AraC family transcriptional regulator.
 
 
 0.405
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.