STRINGSTRING
NGR_a00180 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_a00180" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_a00180annotation not available (516 aa)    
Predicted Functional Partners:
ACP25995.1
annotation not available (258 aa)
     
  0.959
NGR_a00170
Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA; y4kI; NGR234_195; Belongs to the IS21/IS1162 putative ATP-binding protein family (263 aa)
     
  0.782
AAB91628.1
y4tA; NGR234_363 (263 aa)
     
  0.782
AAB91855.1
y4bM; NGR234_33 (263 aa)
     
  0.782
NGR_b01580
Putative ATP-binding protein of disrupted insertion sequence; y4pL-like (245 aa)
     
  0.779
NGR_a02000
Putative insertion sequence ATP-binding protein y4pL; y4pL; NGR234_303; Belongs to the IS21/IS1162 putative ATP-binding protein family (245 aa)
     
  0.778
NGR_a01320
Putative insertion sequence ATP-binding protein y4uH; y4uH; NGR234_392; Belongs to the IS21/IS1162 putative ATP-binding protein family (248 aa)
     
  0.769
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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