Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACP24008.1 | ACP24009.1 | NGR_c02080 | NGR_c02090 | Predicted aminotransferase, class I and II. | Beta-ketoacyl synthase. | 0.915 |
ACP24008.1 | ACP24399.1 | NGR_c02080 | NGR_c06060 | Predicted aminotransferase, class I and II. | long-chain-fatty-acid--CoA ligase. | 0.634 |
ACP24008.1 | bioF | NGR_c02080 | NGR_c25130 | Predicted aminotransferase, class I and II. | 8-amino-7-oxononanoate synthase BioF. | 0.922 |
ACP24008.1 | tdh | NGR_c02080 | NGR_c22690 | Predicted aminotransferase, class I and II. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.538 |
ACP24009.1 | ACP24008.1 | NGR_c02090 | NGR_c02080 | Beta-ketoacyl synthase. | Predicted aminotransferase, class I and II. | 0.915 |
ACP24009.1 | ACP24399.1 | NGR_c02090 | NGR_c06060 | Beta-ketoacyl synthase. | long-chain-fatty-acid--CoA ligase. | 0.995 |
ACP24009.1 | bioF | NGR_c02090 | NGR_c25130 | Beta-ketoacyl synthase. | 8-amino-7-oxononanoate synthase BioF. | 0.567 |
ACP24009.1 | hemA | NGR_c02090 | NGR_c30700 | Beta-ketoacyl synthase. | 5-aminolevulinic acid synthase. | 0.567 |
ACP24009.1 | kbl | NGR_c02090 | NGR_c22700 | Beta-ketoacyl synthase. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.580 |
ACP24009.1 | tdh | NGR_c02090 | NGR_c22690 | Beta-ketoacyl synthase. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.474 |
ACP24399.1 | ACP24008.1 | NGR_c06060 | NGR_c02080 | long-chain-fatty-acid--CoA ligase. | Predicted aminotransferase, class I and II. | 0.634 |
ACP24399.1 | ACP24009.1 | NGR_c06060 | NGR_c02090 | long-chain-fatty-acid--CoA ligase. | Beta-ketoacyl synthase. | 0.995 |
ACP24399.1 | ACP26610.1 | NGR_c06060 | NGR_c28640 | long-chain-fatty-acid--CoA ligase. | Putative threonine dehydratase. | 0.472 |
ACP24399.1 | bioF | NGR_c06060 | NGR_c25130 | long-chain-fatty-acid--CoA ligase. | 8-amino-7-oxononanoate synthase BioF. | 0.634 |
ACP24399.1 | hemA | NGR_c06060 | NGR_c30700 | long-chain-fatty-acid--CoA ligase. | 5-aminolevulinic acid synthase. | 0.634 |
ACP24399.1 | ilvA2 | NGR_c06060 | NGR_c14880 | long-chain-fatty-acid--CoA ligase. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.472 |
ACP24399.1 | kbl | NGR_c06060 | NGR_c22700 | long-chain-fatty-acid--CoA ligase. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.634 |
ACP24399.1 | tdh | NGR_c06060 | NGR_c22690 | long-chain-fatty-acid--CoA ligase. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.508 |
ACP26610.1 | ACP24399.1 | NGR_c28640 | NGR_c06060 | Putative threonine dehydratase. | long-chain-fatty-acid--CoA ligase. | 0.472 |
ACP26610.1 | ACP26616.1 | NGR_c28640 | NGR_c28700 | Putative threonine dehydratase. | Putative low-specificity l-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | 0.915 |
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