Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP26087.1MaoC-like dehydratase. (154 aa)    
Predicted Functional Partners:
ACP26088.1
MaoC domain protein.
 
    
0.815
ychF
GTP-binding protein, putative; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.763
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 0.724
ACP24009.1
Beta-ketoacyl synthase.
  
 0.653
fadB
3-hydroxyacyl-CoA dehydrogenase.
  
 0.589
ACP26365.1
enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase.
  
 0.589
ACP24286.1
acyl-CoA dehydrogenase domain protein.
 
 0.547
ACP26377.1
Putative beta-ketoadipyl CoA thiolase.
 
 
 0.499
clpS1
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
       0.487
ACP23969.1
acyl-CoA dehydrogenase protein.
  
 0.475
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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