STRINGSTRING
NGR_c23280 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c23280" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c23280annotation not available (154 aa)    
Predicted Functional Partners:
NGR_c23290
annotation not available (156 aa)
 
       
0.907
ychF
Ribosome-binding ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner (367 aa)
              0.857
NGR_c26080
annotation not available (710 aa)
   
   
  0.579
fadB
annotation not available (737 aa)
   
   
  0.579
NGR_c01400
annotation not available (336 aa)
 
        0.561
clpS1
ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (103 aa)
              0.528
NGR_c32720
annotation not available (393 aa)
   
 
  0.478
NGR_c29930
annotation not available (393 aa)
   
 
  0.478
NGR_c26200
annotation not available (138 aa)
   
 
  0.478
NGR_c05020
annotation not available (399 aa)
   
 
  0.478
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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