STRINGSTRING
rpoE protein (Sinorhizobium fredii NGR234) - STRING interaction network
"rpoE" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpoEannotation not available (172 aa)    
Predicted Functional Partners:
NGR_c23450
annotation not available (275 aa)
 
 
 
  0.946
ntrB
annotation not available (384 aa)
           
  0.663
xylA
annotation not available (436 aa)
           
  0.661
fixO1
annotation not available (269 aa)
           
  0.661
ureE
Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly (159 aa)
           
  0.661
flgF
annotation not available (241 aa)
           
  0.661
fixB
Protein FixB; May play a role in a redox process involved in nitrogen fixation (369 aa)
           
  0.661
NGR_c00760
annotation not available (239 aa)
 
 
 
  0.596
NGR_c35180
annotation not available (783 aa)
     
 
  0.541
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1401 aa)
   
 
  0.541
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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