STRINGSTRING
NGR_c23640 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c23640" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c23640annotation not available (318 aa)    
Predicted Functional Partners:
NGR_c23650
annotation not available (281 aa)
 
  0.996
NGR_c23660
annotation not available (349 aa)
  0.995
NGR_c27410
annotation not available (285 aa)
 
  0.977
NGR_c07960
annotation not available (295 aa)
 
  0.972
NGR_c20380
annotation not available (295 aa)
 
  0.970
NGR_c18260
annotation not available (348 aa)
  0.967
NGR_c20370
annotation not available (271 aa)
  0.965
NGR_c27420
annotation not available (275 aa)
  0.963
betI
HTH-type transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes (195 aa)
 
     
  0.655
NGR_c20360
annotation not available (77 aa)
   
 
  0.597
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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