Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACP26123.1Proline/glycine betaine ABC transporter, substrate-binding protein. (318 aa)    
Predicted Functional Partners:
ACP26124.1
Proline/glycine betaine ABC transporter, permease protein.
 
 0.999
ACP26490.1
Putative glycine betaine/L-proline ABC transporter, permease protein.
 
 0.991
ACP26125.1
Putative glycine betaine/L-proline ABC transporter, ATP-binding protein.
 
 0.990
ACP24589.1
Hypothetical amino acid ABC-transporter ATP-binding protein.
 
 0.987
ACP25801.1
Putative permease component of ABC transporter.
 
 0.976
ACP26491.1
Putative glycine betaine/L-proline transport ATP binding subunit.
 
 0.962
ACP25590.1
Putative ATP-binding component of ABC transporter.
 
 0.960
ACP25800.1
Putative ATP-binding component of ABC transporter.
 
 0.960
betI
Putative TetR family transcriptional regulator; Repressor involved in choline regulation of the bet genes.
 
     0.664
ACP25449.1
Toulene ABC transporter, permease protein, putative.
  
  
 0.552
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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