STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP26171.1ABC transporter (sugar), membrane spanning protein; Belongs to the binding-protein-dependent transport system permease family. (404 aa)    
Predicted Functional Partners:
ACP26172.1
Putative ATP-binding component of ABC transporter protein.
  
 0.959
chvE
Multiple sugar-binding periplasmic receptor ChvE precursor.
  
 0.928
xylF
Xylose binding protein transport system, XylF.
 
  
 0.775
ACP24420.1
Putative ribose ABC transporter, ribose-binding protein.
  
 0.630
gguC
GguC protein, involved in sugar transport.
 
   
 0.629
ACP24445.1
Putative solute-binding component of ABC transporter.
  
 0.614
ACP25502.1
Putative ribose transport system, substrate-binding protein.
  
 0.606
ACP25501.1
Putative ribose transport system, substrate-binding protein.
  
 0.473
ACP27098.1
Periplasmic binding protein/LacI transcriptional regulator.
  
 0.462
ACP27099.1
Predicted sugar ABC transporter, ATP-binding protein.
  
 0.452
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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