STRINGSTRING
chvE protein (Sinorhizobium fredii NGR234) - STRING interaction network
"chvE" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chvEannotation not available (355 aa)    
Predicted Functional Partners:
NGR_c24130
annotation not available (404 aa)
   
  0.950
NGR_c24140
annotation not available (511 aa)
 
   
  0.899
xylH
annotation not available (438 aa)
   
  0.696
rbsA2
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family (503 aa)
   
   
  0.692
ugpE
Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane (280 aa)
           
  0.665
ftsX
annotation not available (315 aa)
           
  0.661
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner (228 aa)
           
  0.661
ftsE
annotation not available (280 aa)
           
  0.661
ugpC
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system (379 aa)
           
  0.660
NGR_c24160
annotation not available (327 aa)
 
     
  0.552
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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