STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP26185.1Hypothetical protein. (98 aa)    
Predicted Functional Partners:
ACP24048.1
Predicted carbohydrate kinase contains FGGY family domain.
  
  
 0.749
xylB
Xylulokinase.
  
  
 0.749
ACP27010.1
Major facilitator superfamily MFS-1.
  
  
 0.665
iolD
Myo-inositol catabolism, acetolactate synthase protein IolD; Belongs to the TPP enzyme family.
   
    0.532
ACP27423.1
Thiamine pyrophosphate domain protein, TPP binding region; Belongs to the TPP enzyme family.
   
    0.532
ACP24041.1
Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
  
  
 0.422
ACP26183.1
Hypothetical protein.
       0.413
ACP26184.1
Hypothetical protein.
       0.413
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.