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NGR_c24400 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c24400" - dTDP-4-dehydrorhamnose 3,5-epimerase in Sinorhizobium fredii NGR234
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
NGR_c24400dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3’ and C5’positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose; Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family (177 aa)    
Predicted Functional Partners:
rmlD
Probable dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose. RmlD uses NADH and NADPH nearly equally well (By similarity) (296 aa)
  0.998
rmlB
Probable dTDP-glucose 4,6-dehydratase; y4gF; NGR234_121 (350 aa)
 
  0.986
NGR_c08440
annotation not available (667 aa)
         
    0.900
rmlA
Probable glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis; Belongs to the glucose-1-phosphate thymidylyltransferase family (286 aa)
   
  0.889
wbgA
Uncharacterized protein y4gI; y4gI; NGR234_124 (909 aa)
 
   
  0.853
NGR_a03520
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3’ and C5’positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose (195 aa)
 
   
 
0.826
NGR_c10100
annotation not available (536 aa)
   
   
  0.812
ddhA
annotation not available (255 aa)
 
 
  0.792
NGR_c24370
annotation not available (258 aa)
 
     
  0.781
NGR_c24380
annotation not available (276 aa)
 
   
  0.777
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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