STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP26211.1Hypothetical protein. (136 aa)    
Predicted Functional Partners:
ACP24798.1
Putative transmembrane protein.
 
  
 0.848
ACP26637.1
Hypothetical protein.
  
     0.558
ACP25901.1
Hypothetical protein.
  
     0.528
ACP26209.1
Hypothetical protein.
       0.507
ACP26210.1
Hypothetical protein.
       0.490
ACP24737.1
Putative transmembrane protein.
  
     0.470
ACP25146.1
Hypothetical protein.
  
     0.451
ACP26212.1
Hypothetical protein.
       0.450
ACP25566.1
Hypothetical protein.
  
     0.445
ACP24360.1
Putative transmembrane protein.
  
     0.426
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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