Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP26212.1Hypothetical protein. (306 aa)    
Predicted Functional Partners:
exbD
Biopolymer transport ExbD protein.
 
 
 0.953
tolR
Putative biopolymer transport protein, TolR.
  
 
 0.937
exbB
Biopolymer transport ExbB protein.
 
 
 0.918
ACP26111.1
Putative hemin receptor.
 
 
 0.914
tolQ
Putative TolQ protein uptake system component; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.889
ACP26213.1
Hypothetical protein.
 
     0.877
ACP25935.1
Ferrichrysobactin receptor precursor.
 
 
 0.871
fhuF
Ferric iron reductase protein FhuF.
  
    0.796
hmuV
ABC transporter component for heme transport; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
   
 0.772
ACP26215.1
ABC transporter, hemin substrate binding protein.
 
  
 0.751
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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