STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP26239.1Putative transcriptional regulator, TetR family. (213 aa)    
Predicted Functional Partners:
amaB
N-carbamoyl-beta-alanine amidohydrolase protein.
 
     0.693
dht
Dihydropyrimidinase.
 
     0.594
ACP26244.1
ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit.
 
     0.569
ACP26246.1
ABC-type nitrate/sulfonate/bicarbonate transportsystems periplasmic components-like protein.
  
   
 0.560
ACP26245.1
ABC transporter, membrane spanning protein.
 
     0.518
ACP24399.1
long-chain-fatty-acid--CoA ligase.
     
 0.464
ACP26234.1
Dihydropyrimidine dehydrogenase.
  
   
 0.449
ACP26243.1
ABC nitrate transporter, nucleotide binding/ATPase protein.
  
     0.442
gltB2
Glutamate synthase [NADPH] large chain.
  
   
 0.413
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.