STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amaBN-carbamoyl-beta-alanine amidohydrolase protein. (416 aa)    
Predicted Functional Partners:
dht
Dihydropyrimidinase.
 
 
 0.996
ACP26234.1
Dihydropyrimidine dehydrogenase.
 
 0.953
gltB2
Glutamate synthase [NADPH] large chain.
 
 
 0.915
ACP26155.1
Polysaccharide deacetylase family protein.
   
 0.903
ACP26298.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.803
ACP27025.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.803
ACP26239.1
Putative transcriptional regulator, TetR family.
 
     0.693
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.644
ACP27165.1
Putative hydantoinase B/oxoprolinase family protein.
 
  
  0.564
ACP26246.1
ABC-type nitrate/sulfonate/bicarbonate transportsystems periplasmic components-like protein.
 
   
 0.548
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.