STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP26289.1Putative ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily. (345 aa)    
Predicted Functional Partners:
ACP26288.1
ABC transporter permease protein.
 
 
 0.972
ACP26287.1
Binding-protein-dependent transport systems inner membrane component.
  
 0.967
ACP26290.1
Putative substrate-binding component of ABC transporter.
 
  
 0.841
ACP26286.1
Putative hydrolase.
 
   
 0.808
potH
Putrescine ABC transport system permease protein PotH.
 
 
 0.786
ACP26199.1
Dipeptide ABC transporter, ATP-binding protein.
 
    
0.750
potI
Putrescine ABC transporter system permease protein PotI.
  
 0.737
ACP25932.1
Putative transmembrane component of ABC transporter.
 
 0.727
ACP24272.1
Putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein.
 
  
 0.668
ACP25933.1
Putative transmembrane component of ABC transporter.
 
  
 0.644
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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