Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP26325.1Hypothetical protein. (179 aa)    
Predicted Functional Partners:
ACP26324.1
FAD-binding monooxygenase.
 
  
 0.708
ACP26326.1
Alcohol dehydrogenase; Zn containing; adh-3.
       0.618
ACP26342.1
Putative hydrolase.
  
 
   0.494
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
  
 0.437
ACP27094.1
HpcH/HpaI aldolase /citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family.
 
    0.435
ACP27167.1
Putative HpcH/HpaI aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family.
 
    0.435
ACP26487.1
Putative transcriptional regulator, GntR family.
  
    0.408
ACP27256.1
Putative transcriptional regulator, GntR family.
  
    0.408
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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