STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fixO1Cytochrome C oxidase, FixO chain. (269 aa)    
Predicted Functional Partners:
fixP1
FixP3 cytochrome c oxidase membrane anchored subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 0.999
fixN1
Cytochrome-c oxidase, FixN chain; Belongs to the heme-copper respiratory oxidase family.
 0.999
fixN2
Cytochrome-c oxidase FixN2; Belongs to the heme-copper respiratory oxidase family.
 
 0.998
fixP2
Cytochrome-c oxidase FixP2; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 
 0.997
ACP26333.1
Cytochrome c oxidase subunit I.
 
  
  0.976
fixG
Nitrogen fixation protein FixG.
 
  
 0.961
fixQ
Putative cbb3 cytochrome oxidase subunit FixQ protein.
 
  
 0.960
fixS1
FixS2 nitrogen fixation protein.
 
  
 0.914
fixO2
Cytochrome-c oxidase FixO2.
  
  
 
0.903
fixI2
FixI2 E1-E2 type cation ATPase.
 
   
 0.891
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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