Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP26339.1Hypothetical protein. (266 aa)    
Predicted Functional Partners:
ACP25104.1
Hypothetical protein.
  
     0.550
ACP25296.1
Molybdopterin biosynthesis enzyme.
  
     0.541
ACP26543.1
Zn-dependent hydrolase of the beta-lactamase fold family.
  
    0.519
fixQ
Putative cbb3 cytochrome oxidase subunit FixQ protein.
 
     0.499
ACP26333.1
Cytochrome c oxidase subunit I.
 
    0.495
fixO1
Cytochrome C oxidase, FixO chain.
       0.461
fixN1
Cytochrome-c oxidase, FixN chain; Belongs to the heme-copper respiratory oxidase family.
       0.461
fixP1
FixP3 cytochrome c oxidase membrane anchored subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
    0.436
ACP26334.1
Hypothetical protein.
       0.435
ACP24255.1
Conserved hypothetical protein.
  
     0.427
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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