STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP26342.1Putative hydrolase. (313 aa)    
Predicted Functional Partners:
ACP26341.1
Hypothetical protein.
   
   0.685
ACP26340.1
Putative antibiotic biosynthesis monooxygenase.
       0.658
mdh
malate/L-sulfolactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
 
     0.601
ACP26343.1
Putative NADP+ dependent succinate-semialdehyde dehydrogenase.
     
 0.514
ACP26344.1
Putative hydroxypyruvate isomerase; Belongs to the hyi family.
       0.508
ACP26325.1
Hypothetical protein.
  
 
   0.507
ACP26395.1
Putative methytransferase.
 
   
 0.466
ACP26346.1
Conserved hypothetical protein.
       0.451
ACP27010.1
Major facilitator superfamily MFS-1.
  
  
 0.417
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.