Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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[Homology]
Score
paaDPhenylacetic acid degradation protein PaaD. (156 aa)    
Predicted Functional Partners:
paaF
phenylacetate-CoA ligase PaaF; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.995
paaI
Phenylacetic acid degradation protein PaaI.
 
 
 0.988
paaB2
Phenylacetic acid degradation protein PaaB.
 
 
 0.988
paaJ
Phenylacetic acid degradation protein PaaJ.
 
 
 0.985
paaG
phenylacetate-CoA oxygenase PaaG.
 
 
 0.985
paaK
phenylacetate-CoA oxygenase/reductase PaaK.
 
 
 0.978
paaB1
Phenylacetate degradation, enoyl-CoA hydratase PaaB.
 
 
 0.946
ACP26371.1
Ring-oxidation complex protein 1 in the phenylacetic acid catabolism pathway.
 
 
 0.937
ACP26369.1
Putative transcriptional regulator, TetR family.
 
     0.838
paaN
Phenylacetic acid degradation protein PaaN.
 
  
 0.811
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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