STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP26415.1Putative competence protein F; COMF. (281 aa)    
Predicted Functional Partners:
ACP24873.1
DNA processing chain A.
 
 
 0.926
radC
DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.869
ACP27405.1
Mg chelatase-related protein.
 
  
 0.836
ACP25128.1
DNA uptake protein.
 
  
 0.811
ACP24078.1
Conserved hypothetical protein.
   
    0.792
nagA
N-acetylglucosamine-6-phosphate deacetylase.
  
    0.736
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.684
ACP26414.1
Putative glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
       0.668
ACP24466.1
Hypothetical protein.
   
  
 0.660
tyrC
Prephenate dehydrogenase.
   
  
 0.660
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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