STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP26429.1Putative ethanolamine/propanediol ammonia-lyase heavy chain. (782 aa)    
Predicted Functional Partners:
ACP24622.1
Glycerophosphoryl diester phosphodiesterase.
     
  0.900
ACP25575.1
Hypothetical protein, possibly linked to cobalamin synthesis.
     
  0.900
ACP26074.1
Acetaldehyde dehydrogenase 2; Belongs to the aldehyde dehydrogenase family.
  
 
 0.702
ACP25908.1
Amino acid/metabolite permease.
  
  
 0.545
ACP26599.1
Arginine/ornithine antiporter.
  
  
 0.545
ACP26600.1
Amino acid/polyamine transporter I.
  
  
 0.545
ACP24518.1
Alcohol dehydrogenase.
     
  0.499
adhC6
Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase; FDH; FALDH; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
  0.499
ACP25568.1
Alcohol dehydrogenase protein.
     
  0.499
adhC5
Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase; FDH; FALDH; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
  0.499
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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