Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP26508.1Hypothetical protein. (215 aa)    
Predicted Functional Partners:
ACP26506.1
Two component response regulator.
  
 0.985
ACP25415.1
Two component sensor kinase.
 
 0.967
ACP26621.1
Putative two-component response regulator transcriptional regulatory protein.
  
 0.959
ACP26509.1
Conserved hypothetical protein.
 
     0.850
ACP26503.1
Hypothetical protein.
  
    0.746
ACP23832.1
Sensor protein.
   
 
 0.740
ftsX
Putative cell division protein FtsX.
  
     0.734
ACP24224.1
Hypothetical protein.
  
     0.728
ACP24569.1
Two-component response regulator protein.
  
 
 0.723
ACP26430.1
Hypothetical protein.
  
     0.723
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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