STRINGSTRING
serC protein (Sinorhizobium fredii NGR234) - STRING interaction network
"serC" - Phosphoserine aminotransferase in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
serCPhosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (392 aa)    
Predicted Functional Partners:
NGR_c27700
annotation not available (531 aa)
 
  0.996
serB
annotation not available (295 aa)
   
 
  0.970
thrC
annotation not available (465 aa)
   
  0.945
pdxA3
4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) (342 aa)
         
  0.941
NGR_c26270
annotation not available (989 aa)
       
    0.903
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide (394 aa)
   
 
  0.652
NGR_c34780
annotation not available (319 aa)
 
 
  0.633
NGR_c15100
annotation not available (336 aa)
 
 
  0.633
trpE
annotation not available (729 aa)
   
   
  0.621
NGR_c35930
annotation not available (343 aa)
 
 
  0.617
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (22%) [HD]