STRINGSTRING
NGR_c27730 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c27730" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c27730annotation not available (272 aa)    
Predicted Functional Partners:
NGR_c28630
annotation not available (479 aa)
   
          0.713
NGR_c24550
annotation not available (306 aa)
   
 
 
  0.701
NGR_c05440
annotation not available (182 aa)
   
          0.642
NGR_c20620
annotation not available (1247 aa)
   
     
  0.634
NGR_c09250
annotation not available (147 aa)
   
          0.634
rpmJ
annotation not available (41 aa)
       
 
  0.603
NGR_c17170
annotation not available (758 aa)
   
 
  0.602
rpsI
annotation not available (155 aa)
     
 
  0.598
secA
Protein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family (901 aa)
     
 
  0.592
rpsL
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy (123 aa)
       
 
  0.590
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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