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NGR_c27940 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c27940" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c27940annotation not available (332 aa)    
Predicted Functional Partners:
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group (170 aa)
   
        0.575
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (647 aa)
     
        0.544
chvI
Transcriptional regulatory protein ChvI; Member of a two-component regulatory system ChvG(ExoS)/ChvI involved in regulating the production of succinoglycan (241 aa)
     
        0.524
NGR_c08190
annotation not available (688 aa)
     
        0.518
NGR_a00990
Uncharacterized protein y4wF; y4wF; NGR234_427; Belongs to the bacterial luciferase oxidoreductase family (342 aa)
   
          0.516
NGR_c16770
annotation not available (190 aa)
 
 
  0.470
NGR_c12640
annotation not available (194 aa)
 
   
  0.456
NGR_c25270
annotation not available (187 aa)
   
 
  0.401
NGR_c00560
annotation not available (184 aa)
   
 
  0.401
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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