STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP26570.1Sel1 domain protein repeat-containing protein. (378 aa)    
Predicted Functional Partners:
thiE
Thiamine-phosphate pyrophosphorylase.
       0.789
exoR
Exopolysaccharide production negative regulator precursor.
  
     0.766
ACP26118.1
Hypothetical protein.
   
 0.652
ACP26572.1
Putative transmembrane protein.
       0.569
ACP26573.1
Putative transcriptional regulator, ArsR family.
  
    0.488
suhB
Inositol-1-monophosphatase.
       0.456
hcpD
Beta-lactamase HcpD precursor; Cysteine-richprotein D; PBP 4; penicillin-binding protein 4.
 
    
0.454
ACP25433.1
Kinesin-like protein.
 
 
 
 0.453
ndvA
Glucan exporter ATP-binding protein; Involved in Beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
  
  0.450
lptD
Putative organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.444
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.