Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACP26580.1Putative esterase/hydrolase. (348 aa)    
Predicted Functional Partners:
ACP24009.1
Beta-ketoacyl synthase.
  
 0.914
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 0.883
ACP26579.1
TPR repeat-containing protein.
 
   0.763
ACP25435.1
Putative hydrolase.
  
     0.567
rpmJ
50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
       0.524
ACP23969.1
acyl-CoA dehydrogenase protein.
 
 0.497
ACP24286.1
acyl-CoA dehydrogenase domain protein.
 
 0.490
ACP26608.1
Hypothetical protein.
  
 0.451
ACP24877.1
acyl-CoA dehydrogenase.
  
 0.421
ACP25920.1
Putative acyl-CoA dehydrogenase.
  
 0.421
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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