STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP26591.1Putative GGDEF family regulator. (316 aa)    
Predicted Functional Partners:
ACP24202.1
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain precursor.
 
 
 0.849
ACP26659.1
Putative transmembrane sensory box GGDEF/EAL protein.
 
 
 0.836
ACP26753.1
Putative transmembrane GGDEF/EAL domain protein.
 
  
 0.826
ACP26178.1
Putative GGDEF/EAL domain transcriptional regulator.
 
 
 0.818
ACP25043.1
Putative transmembrane sensory box GGDEF/EAL family protein.
 
 
 0.810
ACP24271.1
c-di-GMP phosphodiesterase A-related protein.
 
 
 0.805
ACP24497.1
Putative GGDEF/EAL sensory box protein.
 
  
 0.796
ACP25262.1
Putative transmembrane GGDEF sensory box protein.
 
   
 0.785
prfB
Peptide chain release factor 2 protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
    0.602
ACP26710.1
Sensory box/GGDEF family protein.
 
 
0.594
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.