Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP26606.1Hypothetical protein. (524 aa)    
Predicted Functional Partners:
ACP26607.1
Putative membrane protein.
 
 
 0.950
ACP26608.1
Hypothetical protein.
   
 0.822
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 
 0.768
ACP24482.1
Putative cell division protein; Belongs to the AAA ATPase family.
   
 0.764
ACP25999.1
Putative ATP-dependent hydrolase protein; Belongs to the AAA ATPase family.
   
 0.764
ftsH
Putative cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.764
ACP24338.1
Peptidase, family M16 protein; Belongs to the peptidase M16 family.
  
 0.756
ACP26609.1
Hypothetical protein.
       0.538
ctaC
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
   0.528
coxM
Cytochrome-c oxidase subunit II protein.
   
   0.528
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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