STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltB1Glutamate synthase [NADPH] large chain. (1574 aa)    
Predicted Functional Partners:
gltB2
Glutamate synthase [NADPH] large chain.
 
 0.999
gltD
Glutamate synthase [NADPH] small chain.
 0.999
glnA1
Glutamine synthetase protein.
  
 
 0.972
glnA3
Glutamine synthetase I; glutamate--ammonia ligase I; GSI.
  
 
 0.972
glnA2
Glutamine synthetase.
  
 
 0.972
carB
Carbamoyl-phosphate synthetase ammonia chain; Belongs to the CarB family.
  
 
 0.965
glmS2
Isomerizing glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
 0.955
aatA3
Aspartate aminotransferase A.
  
 
 0.944
attA1
Aspartate aminotransferase.
  
 
 0.944
aatA2
Aspartate aminotransferase A.
  
 
 0.944
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.