Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACP26379.1 | ACP26610.1 | NGR_c26220 | NGR_c28640 | Serine--glyoxylate aminotransferase; SGAT. | Putative threonine dehydratase. | 0.922 |
| ACP26379.1 | ACP26616.1 | NGR_c26220 | NGR_c28700 | Serine--glyoxylate aminotransferase; SGAT. | Putative low-specificity l-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | 0.931 |
| ACP26379.1 | gcvP | NGR_c26220 | NGR_c15470 | Serine--glyoxylate aminotransferase; SGAT. | Decarboxylating glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.947 |
| ACP26379.1 | glyA | NGR_c26220 | NGR_c09570 | Serine--glyoxylate aminotransferase; SGAT. | Serine hydroxymethyltransferase 1; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.937 |
| ACP26379.1 | hemA | NGR_c26220 | NGR_c30700 | Serine--glyoxylate aminotransferase; SGAT. | 5-aminolevulinic acid synthase. | 0.909 |
| ACP26379.1 | ilvA2 | NGR_c26220 | NGR_c14880 | Serine--glyoxylate aminotransferase; SGAT. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.922 |
| ACP26379.1 | kbl | NGR_c26220 | NGR_c22700 | Serine--glyoxylate aminotransferase; SGAT. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.909 |
| ACP26379.1 | soxA1 | NGR_c26220 | NGR_c29020 | Serine--glyoxylate aminotransferase; SGAT. | Sarcosine oxidase, alpha subunit. | 0.926 |
| ACP26379.1 | soxD1 | NGR_c26220 | NGR_c29030 | Serine--glyoxylate aminotransferase; SGAT. | Sarcosine oxidase, delta subunit. | 0.900 |
| ACP26610.1 | ACP26379.1 | NGR_c28640 | NGR_c26220 | Putative threonine dehydratase. | Serine--glyoxylate aminotransferase; SGAT. | 0.922 |
| ACP26610.1 | ACP26616.1 | NGR_c28640 | NGR_c28700 | Putative threonine dehydratase. | Putative low-specificity l-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | 0.915 |
| ACP26610.1 | gcvP | NGR_c28640 | NGR_c15470 | Putative threonine dehydratase. | Decarboxylating glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.411 |
| ACP26610.1 | glyA | NGR_c28640 | NGR_c09570 | Putative threonine dehydratase. | Serine hydroxymethyltransferase 1; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.913 |
| ACP26610.1 | ilvA2 | NGR_c28640 | NGR_c14880 | Putative threonine dehydratase. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.927 |
| ACP26610.1 | thrC | NGR_c28640 | NGR_c05430 | Putative threonine dehydratase. | Threonine synthetase protein. | 0.954 |
| ACP26616.1 | ACP26379.1 | NGR_c28700 | NGR_c26220 | Putative low-specificity l-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | Serine--glyoxylate aminotransferase; SGAT. | 0.931 |
| ACP26616.1 | ACP26610.1 | NGR_c28700 | NGR_c28640 | Putative low-specificity l-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | Putative threonine dehydratase. | 0.915 |
| ACP26616.1 | gcvP | NGR_c28700 | NGR_c15470 | Putative low-specificity l-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | Decarboxylating glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.953 |
| ACP26616.1 | glyA | NGR_c28700 | NGR_c09570 | Putative low-specificity l-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | Serine hydroxymethyltransferase 1; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.936 |
| ACP26616.1 | hemA | NGR_c28700 | NGR_c30700 | Putative low-specificity l-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | 5-aminolevulinic acid synthase. | 0.910 |
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