STRINGSTRING
NGR_c29070 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c29070" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c29070annotation not available (295 aa)    
Predicted Functional Partners:
NGR_c02330
annotation not available (685 aa)
 
 
  0.702
NGR_c29220
annotation not available (329 aa)
   
 
  0.590
rpsU
annotation not available (70 aa)
              0.579
NGR_c03350
annotation not available (1117 aa)
   
     
  0.543
alaS1
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (887 aa)
   
 
  0.530
NGR_c31500
annotation not available (112 aa)
       
 
  0.526
NGR_c14750
annotation not available (112 aa)
       
 
  0.526
NGR_c29080
annotation not available (157 aa)
              0.516
NGR_c16500
annotation not available (861 aa)
 
 
  0.514
NGR_c31440
annotation not available (151 aa)
   
 
  0.486
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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