Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP26652.1Hypothetical protein. (157 aa)    
Predicted Functional Partners:
ACP26651.1
O-linked GlcNAc transferase.
 
     0.704
ACP24715.1
Hypothetical protein.
  
     0.696
ACP24556.1
Hypothetical protein.
  
     0.680
ACP24340.1
Hypothetical protein.
  
     0.658
ACP24134.1
Hypothetical protein; Similar to phasin 2.
  
     0.553
ACP24512.1
Hypothetical protein.
  
     0.548
ACP25044.1
Hypothetical protein.
  
     0.545
ACP23854.1
Hypothetical protein.
  
     0.541
ACP25456.1
Hypothetical protein, possibly linked to QS and autoinducer synthesis.
  
     0.493
ACP26582.1
Hypothetical protein.
  
     0.489
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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