Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP26671.1Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
ACP25620.1
Probable transcriptional regulator protein, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.700
ACP25165.1
Putative LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.681
ACP25592.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.666
ACP27163.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.611
ACP25944.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.586
ACP26672.1
ABC-type uncharacterized transport system periplasmic component-like protein.
       0.515
ACP26673.1
Putative nickel ABC transporter, permease protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
       0.515
ACP26174.1
Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.502
ACP24122.1
Predicted transcriptonal regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.432
rpoC
DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 
 0.413
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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