STRINGSTRING
xylA protein (Sinorhizobium fredii NGR234) - STRING interaction network
"xylA" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylAannotation not available (436 aa)    
Predicted Functional Partners:
xylB
annotation not available (484 aa)
 
 
  0.994
NGR_c24690
annotation not available (494 aa)
       
  0.934
NGR_c01160
annotation not available (308 aa)
   
   
  0.924
NGR_c30500
Putative sugar kinase/putative transcriptional regulator; ROK family protein yajF (298 aa)
       
  0.914
glk
annotation not available (339 aa)
     
 
  0.824
xylF
annotation not available (346 aa)
 
 
  0.730
NGR_c06460
annotation not available (541 aa)
           
  0.720
pgi
annotation not available (541 aa)
           
  0.720
glmS2
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (608 aa)
         
  0.707
fixO1
annotation not available (269 aa)
           
  0.661
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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